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Data base (Medicine Biology Pharmacology)
LE WE PMID CA
Data base (Medicine Biology Pharmacology)630Datenbanken (Medizin Biologie Pharmakologie)

Aldo keto reductases

Allergy (Laboratory medicine)

Antibodies (Immunochemistry)

Apoptosis

Autoimmunity

Bacteria (Secretion type III)

Bacteria (Taxonomy)

Bacteriophage

Biobank Repository

Bioinformatics

Biomarker (BASKET)

Blood coagulation

Bone (Pathology)

Cell biology (BASKET)

Cell Nucleus (Scaffold matrix attached regions)

Chemokines

Chromatin

Data base (Medicine Biology Pharmacology)

Data mining

Dendritic cell (Immunology)

Dermatology (BASKET)

Didactics

DNA (Barcoding)

Drug development

Endocrine disruptor

Ensembl

Enzyclopedical

Epigenetics

Escherichia coli (BASKET)

Expressed sequence tags

FASTQ

Fumarate hydratase

Gene expression profiling

Genetics (Basket)

Genetics (GWAS Genome wide association study)

Genetics (Methods)

Genetics (Quantitative trait locus)

Genome (Annotation)

Genome

Geocoding (Epidemiology)

GPIbalpha

Hapmap

Human genetics (BASKET)

Immunodeficiency (Inherited)

Immunology (BASKET)

Innate immunity

Intoxication

Ion channel (BASKET)

Laboratory animal (Mouse)

Laboratory plant (Arabidopsis thaliana)

Lipids

Literature searching

Mass spectrometry

Metabolomics

Microarray (Gene expression analysis)

Morphogenesis (Development)

Mutation (Annotation)

Natural products

Neoplasia (Carcinogenesis)

Neoplasia (Inherited)

Neoplasia (Tumor biology and immunology)

NIH molecular libraries initiative

Oncomine

PharmGKB

Plants (BASKET)

Platelets (BASKET)

Protein (Glycopeptide Glycoprotein)

Protein (Ontology and function prediction)

Protein (protein binding)

Protein (ptm BASKET)

Proteomics

PubChem

Publication issues

Radiation damage and control

Receptor (Nuclear)

RNA (MicroRNA)

RNA (Polymerase)

RNA (RNase P)

Rotavirus

Simulation of biological processes (Bioinformatics)

Species identification

Splicing alternative

Stem cell (Embryonal)

Structure determination at molecular level and finer

Systematic review

Systems biology

TALENs

Teratogenesis

Text mining

Toxicology (BASKET)

Transcriptom

Von Willebrand s factor

Xenobiotics

2003  
1
"Medical Matrix": a directory of clinical, medical web sites.
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2006  
2
2008  
3
E-meducation.org: an open access medical education web portal.
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Medical information on the Internet.
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Analysis of complex disease association and linkage studies using the University of California Santa Cruz Genome Browser.
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2004  
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PharmGKB: the pharmacogenetics and pharmacogenomics knowledge base.
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Potential use of routine databases in health technology assessment.
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Colibri: a functional data base for the Escherichia coli genome.
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Bioinformatics resources for the study of gene regulation in bacteria.
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Databases and software for the comparison of prokaryotic genomes.
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2005  
11
Functional genomics databases on the web.
[16008573] Cell Microbiol 7(8): 1053-9 (2005)
2007  
12
National Institute of Allergy and Infectious Diseases bioinformatics resource centers: new assets for pathogen informatics.
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2006  
13
CED: a conformational epitope database.
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1997  
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The chemokine information source: identification and characterization of novel chemokines using the WorldWideWeb and expressed sequence tag databases.
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2007  
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The European internet-based patient and research database for primary immunodeficiencies: results 2004-06.
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2008  
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UCSC genome browser tutorial.
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2009  
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Comparative analyses of plant transcription factor databases.
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2009  
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JBrowse: a next-generation genome browser.
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2002  
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Time for a unified system of mutation description and reporting: a review of locus-specific mutation databases.
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WebWise: guide to the joint genome institute web site.
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1998  
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WebWise: guide to the Washington University Center for Genetics in Medicine web site.
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1998  
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WebWise: guide to the Institute of Molecular Biology Genome Sequencing Center-Jena web site.
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2008  
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The FH mutation database: an online database of fumarate hydratase mutations involved in the MCUL (HLRCC) tumor syndrome and congenital fumarase deficiency.
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2005  
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Overview of BioCreAtIvE: critical assessment of information extraction for biology.
[15960821] BMC Bioinformatics 6 Suppl 1(): S1 (2005)
2001  
25
SWISS-PROT: connecting biomolecular knowledge via a protein database.
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2008  
26
Open source GIS for HIV/AIDS management.
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2006  
27
Web GIS in practice IV: publishing your health maps and connecting to remote WMS sources using the Open Source UMN MapServer and DM Solutions MapLab.
[16420699] Int J Health Geogr 5(-): 6 (2006)
2005  
28
Web GIS in practice III: creating a simple interactive map of England's Strategic Health Authorities using Google Maps API, Google Earth KML, and MSN Virtual Earth Map Control.
[16176577] Int J Health Geogr 4(-): 22 (2005)
2002  
29
Searching the Literatura Latino Americana e do Caribe em Ciências da Saúde (LILACS) database improves systematic reviews.
[11914305] Int J Epidemiol 31(1): 112-4 (2002)
2005  
30
CareSearch: finding and evaluating Australia's missing palliative care literature.
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2009  
31
An informatics supported web-based data annotation and query tool to expedite translational research for head and neck malignancies.
[19912644] BMC Cancer 9(-): 396 (2009)
2007  
32
MutationView/KMcancerDB: a database for cancer gene mutations.
[17233812] Cancer Sci 98(3): 259-67 (2007)
2006  
33
Japanese single nucleotide polymorphism database for 267 possible drug-related genes.
[16367916] Cancer Sci 97(1): 16-24 (2006)
2009  
34
GEMS (Gene Expression MetaSignatures), a Web resource for querying meta-analysis of expression microarray datasets: 17beta-estradiol in MCF-7 cells.
[19117983] Cancer Res 69(1): 23-6 (2009)
2002  
35
The Mouse Tumor Biology Database: a public resource for cancer genetics and pathology of the mouse.
[11888882] Cancer Res 62(5): 1235-40 (2002)
2007  
36
Your database is obsolete: The promise of contextual bioinformatics.
[17597919] Bioinformation 1(9): 356 (2007)
2007  
37
Public databases and software for the pathway analysis of cancer genomes.
[19455256] Cancer Inform 3(-): 379-97 (2007)
2002  
38
Welcome, PIER, a new Physicians' Information and Education Resource.
[11926793] Ann Intern Med 136(7): 553-4 (2002)
2007  
39
The CASBAH: a searchable database of caspase substrates.
[17273173] Cell Death Differ 14(4): 641-50 (2007)
1998  
40
A practical guide to orient yourself in the labyrinth of genome databases.
[9735386] Hum Mol Genet 7(10): 1641-8 (1998)
2009  
41
The Israeli National Genetic Database.
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2005  
42
Observational research databases in renal disease.
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2001  
43
Endocrinology resources on the internet.
[11443147] J Clin Endocrinol Metab 86(7): 2942-5 (2001)
2000  
44
Pituitary tumor registry: a novel clinical resource.
[10634382] J Clin Endocrinol Metab 85(1): 168-74 (2000)
2008  
45
General mutation databases: analysis and review.
[17893115] J Med Genet 45(2): 65-70 (2008)
1998  
46
Mutation databases on the Web.
[9678695] J Med Genet 35(7): 529-33 (1998)
2005  
47
Trial Registration at ClinicalTrials.gov between May and October 2005.
[16382064] N Engl J Med 353(26): 2779-87 (2005)
2006  
48
Translating knowledge of the human genome into clinical practice in nephrology dialysis and transplantation: the renal genome network (ReGeNet).
[16935905] Nephrol Dial Transplant 21(10): 2681-3 (2006)
2004  
49
Clinical guidelines online: do they improve compliance?
[15254307] Postgrad Med J 80(945): 415-9 (2004)
2009  
50
TFCat: the curated catalog of mouse and human transcription factors.
[19284633] Genome Biol 10(3): R29 (2009)
2002  
51
Tools and resources for identifying protein families, domains and motifs.
[11806833] Genome Biol 3(1): REVIEWS2001 (2002)
2001  
52
Microarray gene expression database: progress towards an international repository of gene expression data.
[11387034] Genome Biol 2(5): REPORTS4011 (2001)
2004  
53
The Ensembl core software libraries.
[15123588] Genome Res 14(5): 929-33 (2004)
2004  
54
1999  
55
A survey of web resources for basic cancer genetics research.
[10330119] Genome Res 9(5): 397-408 (1999)
2008  
56
Human Proteinpedia as a resource for clinical proteomics.
[18573810] Mol Cell Proteomics 7(10): 2038-47 (2008)
2010  
57
The Gene Wiki: community intelligence applied to human gene annotation.
[19755503] Nucleic Acids Res 38(Database issue): D633-9 (2010)
2009  
58
ToppGene Suite for gene list enrichment analysis and candidate gene prioritization.
[19465376] Nucleic Acids Res 37(Web Server issue): W305-11 (2009)
2009  
59
miR2Disease: a manually curated database for microRNA deregulation in human disease.
[18927107] Nucleic Acids Res 37(Database issue): D98-104 (2009)
2009  
60
PTM-Switchboard--a database of posttranslational modifications of transcription factors, the mediating enzymes and target genes.
[18927104] Nucleic Acids Res 37(Database issue): D66-71 (2009)
2009  
61
ExplorEnz: the primary source of the IUBMB enzyme list.
[18776214] Nucleic Acids Res 37(Database issue): D593-7 (2009)
2008  
62
Microarray retriever: a web-based tool for searching and large scale retrieval of public microarray data.
[18463138] Nucleic Acids Res 36(Web Server issue): W327-31 (2008)
2008  
63
The Genomes On Line Database (GOLD) in 2007: status of genomic and metagenomic projects and their associated metadata.
[17981842] Nucleic Acids Res 36(Database issue): D475-9 (2008)
2008  
64
2008  
65
CEBS--Chemical Effects in Biological Systems: a public data repository integrating study design and toxicity data with microarray and proteomics data.
[17962311] Nucleic Acids Res 36(Database issue): D892-900 (2008)
2007  
66
Graph-based identification of cancer signaling pathways from published gene expression signatures using PubLiME.
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2007  
67
CellCircuits: a database of protein network models.
[17135207] Nucleic Acids Res 35(Database issue): D538-45 (2007)
2007  
68
WormBook: the online review of Caenorhabditis elegans biology.
[17099225] Nucleic Acids Res 35(Database issue): D472-5 (2007)
2006  
69
MetaCyc: a multiorganism database of metabolic pathways and enzymes.
[16381923] Nucleic Acids Res 34(Database issue): D511-6 (2006)
2005  
70
GPS: a comprehensive www server for phosphorylation sites prediction.
[15980451] Nucleic Acids Res 33(Web Server issue): W184-7 (2005)
2004  
71
PeerGAD: a peer-review-based and community-centric web application for viewing and annotating prokaryotic genome sequences.
[15184545] Nucleic Acids Res 32(10): 3124-35 (2004)
2004  
72
RTCGD: retroviral tagged cancer gene database.
[14681473] Nucleic Acids Res 32(Database issue): D523-7 (2004)
2004  
73
GeneDB: a resource for prokaryotic and eukaryotic organisms.
[14681429] Nucleic Acids Res 32(Database issue): D339-43 (2004)
2003  
74
The MetaFMF website: a high quality tool for meta-analysis of FMF.
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2003  
75
INFEVERS: the Registry for FMF and hereditary inflammatory disorders mutations.
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2002  
76
2000  
77
HGBASE: a database of SNPs and other variations in and around human genes.
[10592273] Nucleic Acids Res 28(1): 356-60 (2000)
1999  
78
A comprehensive comparison of multiple sequence alignment programs.
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1997  
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EcoCyc: Enyclopedia of Escherichia coli Genes and Metabolism.
[9016502] Nucleic Acids Res 25(1): 43-51 (1997)
1996  
80
EcoCyc: an encyclopedia of Escherichia coli genes and metabolism.
[8594595] Nucleic Acids Res 24(1): 32-9 (1996)
2002  
81
Gene homology resources on the World Wide Web.
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2008  
82
TranscriptomeBrowser: a powerful and flexible toolbox to explore productively the transcriptional landscape of the Gene Expression Omnibus database.
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2004  
83
Management of fever in neutropenic patients with different risks of complications.
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1995  
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Knockouts. Targeting the mouse genome: a compendium of knockouts (Part I)
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2002  
85
MINT: a Molecular INTeraction database.
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2001  
86
1998  
87
Human and mouse proteomic databases: novel resources in the protein universe.
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1996  
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Human 2-D PAGE databases for proteome analysis in health and disease: http://biobase.dk/cgi-bin/celis.
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1989  
89
Comprehensive, human cellular protein databases and their implication for the study of genome organization and function.
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2005  
90
Large macromolecular complexes in the Protein Data Bank: a status report.
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1998  
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CAMPASS: a database of structurally aligned protein superfamilies.
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2007  
92
Informatics in radiology: RadiologyWiki.org: the free radiology resource that anyone can edit.
[17620476] Radiographics 27(4): 1193-200 (2007)
2007  
93
Radiology education in 2005: world wide web practice patterns, perceptions, and preferences of radiologists.
[17374870] Radiographics 27(2): 563-71 (2007)
2006  
94
RadLex: a new method for indexing online educational materials.
[17102038] Radiographics 26(6): 1595-7 (2006)
2005  
95
infoRAD 2005: your best resource for informatics education.
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1996  
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MoSearch: a radiologist-friendly tool for finding-based diagnostic report and image retrieval.
[8835980] Radiographics 16(4): 923-33 (1996)
1995  
97
CHORUS: a computer-based radiology handbook for international collaboration via the World Wide Web.
[7569141] Radiographics 15(4): 963-70 (1995)
2009  
98
The Human Ageing Genomic Resources: online databases and tools for biogerontologists.
[18986374] Aging Cell 8(1): 65-72 (2009)
2008  
99
A searchable database of genetic evidence for psychiatric disorders.
[18548508] Am J Med Genet B Neuropsychiatr Genet 147B(6): 671-5 (2008)
2005  
100
2003  
101
Databases in the biological sciences. A user's guide to the current copyright landscape.
[12857794] Plant Physiol 132(3): 1131-4 (2003)
2005  
102
Biological databases for plant research.
[15888672] Plant Physiol 138(1): 1-3 (2005)
2005  
103
The maize genetics and genomics database. The community resource for access to diverse maize data.
[15888678] Plant Physiol 138(1): 55-8 (2005)
2006  
104
Natural products: sources and databases.
[16741583] Nat Prod Rep 23(3): 347-56 (2006)
2010  
105
Unmet challenges of structural genomics.
[20810277] Curr Opin Struct Biol 20(5): 587-97 (2010)
2007  
106
Visualization software for molecular assemblies.
[17728125] Curr Opin Struct Biol 17(5): 587-95 (2007)
2009  
107
Is protein classification necessary? Toward alternative approaches to function annotation.
[19269161] Curr Opin Struct Biol 19(3): 363-8 (2009)
2011  
108
FARO server: Meta-analysis of gene expression by matching gene expression signatures to a compendium of public gene expression data.
[21663689] BMC Res Notes 4(-): 181 (2011)
2010  
109
Signaling network of dendritic cells in response to pathogens: a community-input supported knowledgebase.
[20929569] BMC Syst Biol 4(-): 137 (2010)
2008  
110
Biomolecular network querying: a promising approach in systems biology.
[18205908] BMC Syst Biol 2(-): 5 (2008)
2010  
111
DeathBase: a database on structure, evolution and function of proteins involved in apoptosis and other forms of cell death.
[20383157] Cell Death Differ 17(5): 735-6 (2010)
2003  
112
2011  
113
Advancing science through mining libraries, ontologies, and communities.
[21566119] J Biol Chem 286(27): 23659-66 (2011)
2011  
114
Discovering the targets of drugs via computational systems biology.
[21566122] J Biol Chem 286(27): 23653-8 (2011)
2007  
115
Paratope and epitope mapping of the antithrombotic antibody 6B4 in complex with platelet glycoprotein Ibalpha.
[17569666] J Biol Chem 282(32): 23517-24 (2007)
2008  
116
Why and how to use the photographic atlases of the American Registry of Pathology.
[19099029] Medscape J Med 10(10): 235 (2008)
2005  
117
Towards writing the encyclopedia of life: an introduction to DNA barcoding.
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2009  
118
Update of the LIPID MAPS comprehensive classification system for lipids.
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2008  
119
National and international registries of rare bleeding disorders.
[19115503] Blood Transfus 6 Suppl 2(-): s45-8 (2008)
2004  
120
Research applications of the Cambridge Structural Database (CSD).
[15480471] Chem Soc Rev 33(8): 463-75 (2004)
2010  
121
Bioinformatics and molecular modeling in glycobiology.
[20364395] Cell Mol Life Sci 67(16): 2749-72 (2010)
2010  
122
From protein sequences to 3D-structures and beyond: the example of the UniProt knowledgebase.
[20043185] Cell Mol Life Sci 67(7): 1049-64 (2010)
2009  
123
Genome sequence data: management, storage, and visualization.
[19480628] Biotechniques 46(5): 333-4, 336 (2009)
2006  
124
WebMD, Medscape, eMedicine, and the relevance of a medical encyclopedia in 2006.
[16915162] MedGenMed 8(1): 32 (2006)
2011  
125
The BCG world atlas: a new, open-access resource for clinicians and researchers.
[21819321] Expert Rev Anti Infect Ther 9(8): 559-61 (2011)
2008  
126
The ISS Sensitizing Agents Data Bank (BDS).
[18469378] Ann Ist Super Sanita 44(1): 64-74 (2008)
2008  
127
A new database for food safety: EDID (Endocrine disrupting chemicals - Diet Interaction Database).
[18469377] Ann Ist Super Sanita 44(1): 57-63 (2008)
2008  
128
A novel approach: chemical relational databases, and the role of the ISSCAN database on assessing chemical carcinogenicity.
[18469376] Ann Ist Super Sanita 44(1): 48-56 (2008)
2008  
129
The ISS Carcinogens Data Bank (BDC).
[18469374] Ann Ist Super Sanita 44(1): 31-42 (2008)
2008  
130
The ISS National Inventory of Chemical Substances (INSC).
[18469372] Ann Ist Super Sanita 44(1): 16-26 (2008)
2003  
131
A review of new databases and associated web tools.
[12715837] Brief Bioinform 4(1): 91-8 (2003)
2008  
132
Protein structure databases with new web services for structural biology and biomedical research.
[18430752] Brief Bioinform 9(4): 276-85 (2008)
2006  
133
Advances in the Exon-Intron Database (EID).
[16772261] Brief Bioinform 7(2): 178-85 (2006)
2010  
134
Using database research to affect the science and art of medicine.
[20571356] Anesthesiology 113(2): 268-70 (2010)
2010  
135
T3SEdb: data warehousing of virulence effectors secreted by the bacterial Type III Secretion System.
[21106126] BMC Bioinformatics 11 Suppl 7(-): S4 (2010)
2004  
136
VKCDB: voltage-gated potassium channel database.
[14715090] BMC Bioinformatics 5(-): 3 (2004)
2007  
137
PADB: published association database.
[17877839] BMC Bioinformatics 8(-): 348 (2007)
2007  
138
PedGenie: meta genetic association testing in mixed family and case-control designs.
[18005446] BMC Bioinformatics 8(-): 448 (2007)
2007  
139
Requirements and ontology for a G protein-coupled receptor oligomerization knowledge base.
[17537266] BMC Bioinformatics 8(-): 177 (2007)
2007  
140
sIR: siRNA Information Resource, a web-based tool for siRNA sequence design and analysis and an open access siRNA database.
[17540034] BMC Bioinformatics 8(-): 178 (2007)
2008  
141
Chromhome: a rich internet application for accessing comparative chromosome homology maps.
[18366796] BMC Bioinformatics 9(-): 168 (2008)
2008  
142
ArrayWiki: an enabling technology for sharing public microarray data repositories and meta-analyses.
[18541053] BMC Bioinformatics 9 Suppl 6(-): S18 (2008)
2006  
143
The Autoimmune Disease Database: a dynamically compiled literature-derived database.
[16803617] BMC Bioinformatics 7(-): 325 (2006)
2008  
144
Catmap: case-control and TDT meta-analysis package.
[18307795] BMC Bioinformatics 9(-): 130 (2008)
2009  
145
The European internet-based patient and research database for primary immunodeficiencies: results 2006-2008.
[19630863] Clin Exp Immunol 157 Suppl 1(-): 3-11 (2009)
2006  
146
Roadmap or roadkill: a pharmacologist's analysis of the NIH Molecular Libraries Initiative.
[17035662] Mol Interv 6(5): 240-3 (2006)
2002  
147
Evaluation of sequence motifs found in scaffold/matrix-attached regions (S/MARs).
[12140328] Nucleic Acids Res 30(15): 3433-42 (2002)
2011  
148
Bovine Genome Database: integrated tools for genome annotation and discovery.
[21123190] Nucleic Acids Res 39(Database issue): D830-4 (2011)
2011  
149
Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting.
[21493687] Nucleic Acids Res 39(12): e82 (2011)
2011  
150
NCBI Epigenomics: a new public resource for exploring epigenomic data sets.
[21075792] Nucleic Acids Res 39(Database issue): D908-12 (2011)
2011  
151
Towards BioDBcore: a community-defined information specification for biological databases.
[21097465] Nucleic Acids Res 39(Database issue): D7-10 (2011)
2011  
152
NCBI GEO: archive for functional genomics data sets--10 years on.
[21097893] Nucleic Acids Res 39(Database issue): D1005-10 (2011)
2011  
153
OMA 2011: orthology inference among 1000 complete genomes.
[21113020] Nucleic Acids Res 39(Database issue): D289-94 (2011)
2010  
154
MAGIA, a web-based tool for miRNA and Genes Integrated Analysis.
[20484379] Nucleic Acids Res 38(Web Server issue): W352-9 (2010)
2010  
155
WIWS: a protein structure bioinformatics Web service collection.
[20501602] Nucleic Acids Res 38(Web Server issue): W719-23 (2010)
2010  
156
ProBiS: a web server for detection of structurally similar protein binding sites.
[20504855] Nucleic Acids Res 38(Web Server issue): W436-40 (2010)
2010  
157
MARQ: an online tool to mine GEO for experiments with similar or opposite gene expression signatures.
[20513648] Nucleic Acids Res 38(Web Server issue): W228-32 (2010)
2004  
158
siDirect: highly effective, target-specific siRNA design software for mammalian RNA interference.
[15215364] Nucleic Acids Res 32(Web Server issue): W124-9 (2004)
2010  
159
The Sanger FASTQ file format for sequences with quality scores, and the Solexa/Illumina FASTQ variants.
[20015970] Nucleic Acids Res 38(6): 1767-71 (2010)
2007  
160
eTBLAST: a web server to identify expert reviewers, appropriate journals and similar publications.
[17452348] Nucleic Acids Res 35(Web Server issue): W12-5 (2007)
2009  
161
Creation of a registry for human embryonic stem cells carrying an inherited defect: joint collaboration between ESHRE and hESCreg.
[19346524] Hum Reprod 24(7): 1556-60 (2009)
2007  
162
Human aldo-keto reductases: Function, gene regulation, and single nucleotide polymorphisms.
[17537398] Arch Biochem Biophys 464(2): 241-50 (2007)
2008  
163
The curation guidelines of the immune epitope database and analysis resource.
[18688821] Cytometry A 73(11): 1066-70 (2008)
2011  
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Podbat: a novel genomic tool reveals Swr1-independent H2A.Z incorporation at gene coding sequences through epigenetic meta-analysis.
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