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10.1186/s12864-015-2140-x http://scihub22266oqcxt.onion/10.1186/s12864-015-2140-x C4650858!4650858!26576536     free     free     free Warning: file_get_contents(https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pubmed&id=26576536&cmd=llinks): Failed to open stream: HTTP request failed! HTTP/1.1 429 Too Many Requests in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 215 Deprecated: Implicit conversion from float 211.6 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534 Deprecated: Implicit conversion from float 211.6 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534 Deprecated: Implicit conversion from float 211.6 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534 Deprecated: Implicit conversion from float 211.6 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534 Deprecated: Implicit conversion from float 211.6 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534 Deprecated: Implicit conversion from float 245.2 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534 Warning: imagejpeg(C:\Inetpub\vhosts\kidney.de\httpdocs\phplern\26576536.jpg): Failed to open stream: No such file or directory in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 117       BMC+Genomics 2015 ; 16 (�): � Nephropedia Template TP {{tp|p=26576536|t=2015. GenomicInteractions: An R/Bioconductor package for manipulating and investigating chromatin interaction data |pdf=|usr=}}{{26576536}} gab.com Text GenomicInteractions: An R/Bioconductor package for manipulating and investigating chromatin interaction data JO: BMC Genomics http://www.kidney.de/pget.php?&tw=1&pmid=26576536 #FOAvip Background: Precise quantitative and spatiotemporal control of gene expression is necessary to ensure proper cellular differentiation and the maintenance of homeostasis. The relationship between gene expression and the spatial organisation of chromatin is highly complex, interdependent and not completely understood. The development of experimental techniques to interrogate both the higher-order structure of chromatin and the interactions between regulatory elements has recently lead to important insights on how gene expression is controlled. The ability to gain these and future insights is critically dependent on computational tools for the analysis and visualisation of data produced by these techniques. Results and conclusion: We have developed GenomicInteractions, a freely available R/Bioconductor package designed for processing, analysis and visualisation of data generated from various types of chromosome conformation capture experiments. The package allows the easy annotation and summarisation of large genome-wide datasets at both the level of individual interactions and sets of genomic features, and provides several different methods for interrogating and visualising this type of data. We demonstrate this package?s utility by showing example analyses performed on interaction datasets generated using Hi-C and ChIA-PET. Electronic supplementary material: The online version of this article (doi:10.1186/s12864-015-2140-x) contains supplementary material, which is available to authorized users. Twit Text FOAVip GenomicInteractions: An R/Bioconductor package for manipulating and investigating chromatin interaction data ????BMC Genomics http://www.kidney.de/pget.php?&tw=1&pmid=26576536 #FOAvip Twit Text # Free Paper on # # # # # LINK http://www.kidney.de/pget.php?&tw=1&pmid=26576536 #FOAvip English Wikipedia <ref>{{Cite pmid|26576536}}</ref> GenomicInteractions: An R/Bioconductor package for manipulating and investigating chromatin interaction data #MMPMID26576536 Harmston N; Ing-Simmons E; Perry M; Bare?i? A; Lenhard B BMC Genomics 2015[]; 16 (�): � PMID26576536show ga Background: Precise quantitative and spatiotemporal control of gene expression is necessary to ensure proper cellular differentiation and the maintenance of homeostasis. The relationship between gene expression and the spatial organisation of chromatin is highly complex, interdependent and not completely understood. The development of experimental techniques to interrogate both the higher-order structure of chromatin and the interactions between regulatory elements has recently lead to important insights on how gene expression is controlled. The ability to gain these and future insights is critically dependent on computational tools for the analysis and visualisation of data produced by these techniques. Results and conclusion: We have developed GenomicInteractions, a freely available R/Bioconductor package designed for processing, analysis and visualisation of data generated from various types of chromosome conformation capture experiments. The package allows the easy annotation and summarisation of large genome-wide datasets at both the level of individual interactions and sets of genomic features, and provides several different methods for interrogating and visualising this type of data. We demonstrate this package?s utility by showing example analyses performed on interaction datasets generated using Hi-C and ChIA-PET. Electronic supplementary material: The online version of this article (doi:10.1186/s12864-015-2140-x) contains supplementary material, which is available to authorized users. �GenomicInteractions: An R/Bioconductor package for manipulating and in(epmc).pdf DeepDyve Pubget Overpricing